I put the choke on at idle and the engine shuts down. bogs at the top of each gear like it's running out of gas.

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Hi, Bobby and the usual suspects are:
1. Fuel cap or fuel tank is not venting properly.
2. Fuel filter clogged.
3. Fuel line pinched or kinked.
4. Float needle and seat sticking.
5. Float level too low.
6. Carburetor bowl vent line clogged/blocked/pinched.
7. Idle adjusting ***** set too low.
8. Air/fuel mixture ***** set too lean.
9. Idle port, transfer ports, slow air jet clogged.
10. Slow fuel jet clogged.
For more information about your issue and valuable free downloads that you will need please visit the websites below. Good luck and have a nice day.
Losing power bogging on Freeway High RPM Scary Help Please
Info needed on running lean rich
https://www.tradebit.com/filedetail.php/2864660-yamaha-fzr-600-service-repair-manual-pdf
OEM parts for Yamaha
http://www.fzrarchives.com/fzr600/600_manual/1999fzr600r.pdf
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